Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthetase | ASC78_00805 | Q8TUZ4 | - | 183530 - 184468 | 33467.4 |
| lysr family transcriptional regulator | ASC78_00810 | Not Available | + | 184581 - 185543 | 34165.0 |
| asnc family transcriptional regulator | ASC78_00815 | Not Available | - | 185586 - 186059 | 17218.9 |
| saccharopine dehydrogenase | ASC78_00820 | Q9AJC6 | - | 186189 - 187322 | 40786.7 |
| hypothetical protein | ASC78_00825 | Not Available | - | 187488 - 188270 | 29610.5 |
| abc transporter permease | ASC78_00830 | Not Available | + | 188724 - 189986 | 43667.2 |
| hypothetical protein | ASC78_00835 | Not Available | + | 190115 - 190411 | 10742.1 |
| hypothetical protein | ASC78_00840 | Not Available | + | 190551 - 191108 | 20639.9 |
| hypothetical protein | ASC78_00845 | Not Available | - | 191156 - 191413 | 9610.25 |
| hypothetical protein | ASC78_00850 | Not Available | + | 191587 - 191943 | 13187.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.