Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_00755 | Not Available | + | 175437 - 175856 | 14393.1 |
| hypothetical protein | ASC78_00760 | Not Available | + | 175975 - 176298 | 11233.1 |
| transporter | ASC78_00765 | Not Available | + | 176295 - 177719 | 51059.5 |
| copper oxidase | ASC78_00770 | Not Available | + | 177758 - 179173 | 52105.7 |
| hypothetical protein | ASC78_00775 | Not Available | + | 179220 - 179699 | 16859.2 |
| hypothetical protein | ASC78_00780 | Not Available | + | 179730 - 180068 | 11910.5 |
| hypothetical protein | ASC78_00785 | Not Available | + | 180209 - 180634 | 15005.8 |
| mandelate racemase | ASC78_00790 | Not Available | - | 180603 - 181769 | 42428.9 |
| 3-oxoacyl-acp reductase | ASC78_00795 | Q9KQH7 | - | 181802 - 182503 | 23437.3 |
| twin-arginine translocation pathway signal | ASC78_00800 | Not Available | - | 182493 - 183464 | 34363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.