Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_00620 | Not Available | + | 145426 - 146343 | 33031.4 |
| gcn5 family acetyltransferase | ASC78_00625 | Not Available | - | 146324 - 147211 | 31282.6 |
| hypothetical protein | ASC78_00630 | Not Available | - | 147245 - 147481 | 8243.91 |
| aldehyde dehydrogenase | ASC78_00635 | Not Available | + | 147688 - 149202 | 53161.9 |
| hypothetical protein | ASC78_00640 | Not Available | + | 149199 - 149918 | 25382.2 |
| d-amino acid oxidase | ASC78_00645 | Not Available | + | 149938 - 151263 | 47169.4 |
| hypothetical protein | ASC78_00650 | Not Available | + | 151314 - 153023 | 62499.6 |
| hypothetical protein | ASC78_00655 | P42061 | + | 153040 - 154713 | 60891.0 |
| diguanylate cyclase | ASC78_00660 | P42062 | + | 154715 - 155671 | 34933.8 |
| peptide abc transporter permease | ASC78_00665 | P42063 | + | 155668 - 156555 | 31756.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.