Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde oxidoreductase | ASC78_21085 | Q8X6I9 | + | 1121778 - 1122416 | 22065.5 |
| molybdopterin dehydrogenase | ASC78_21090 | P77324 | + | 1122413 - 1123363 | 33523.4 |
| xanthine dehydrogenase | ASC78_21095 | Not Available | + | 1123369 - 1125579 | 78004.7 |
| multidrug transporter | ASC78_21100 | P9WG90 | - | 1125590 - 1127044 | 49490.1 |
| abc transporter substrate-binding protein | ASC78_21105 | Not Available | - | 1127052 - 1128023 | 33902.1 |
| glutamyl-trna amidotransferase | ASC78_21110 | Not Available | - | 1128072 - 1129523 | 51620.8 |
| lysr family transcriptional regulator | ASC78_21115 | Q04778 | + | 1129593 - 1130492 | 32001.5 |
| carboxymethylenebutenolidase | ASC78_21120 | Q43914 | - | 1130509 - 1131744 | 45373.1 |
| flavin oxidoreductase | ASC78_21125 | Not Available | - | 1131788 - 1133521 | 63615.6 |
| alanine-phosphoribitol ligase | ASC78_21130 | Not Available | - | 1133536 - 1134774 | 44673.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.