Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tartrate dehydrogenase | ASC78_00470 | Not Available | - | 111626 - 112711 | 39798.4 |
| abc transporter | ASC78_00475 | Q8X6W1 | - | 112708 - 114357 | 59476.1 |
| dna-directed rna polymerase subunit alpha | ASC78_00480 | Not Available | - | 114357 - 115262 | 31322.0 |
| abc transporter permease | ASC78_00485 | Q8FJK9 | - | 115273 - 116229 | 33892.7 |
| abc transporter substrate-binding protein | ASC78_00490 | Not Available | - | 116270 - 117892 | 58627.3 |
| fad-dependent oxidoreductase | ASC78_00495 | P44732 | - | 117975 - 119267 | 46518.4 |
| dehalogenase | ASC78_00500 | Not Available | - | 119299 - 119964 | 25052.1 |
| gcn5 family acetyltransferase | ASC78_00505 | Not Available | + | 120468 - 121346 | 31166.7 |
| glyoxylate/hydroxypyruvate reductase a | ASC78_00510 | Q8X9K1 | + | 121357 - 122295 | 34521.5 |
| hypothetical protein | ASC78_00515 | Q53196 | + | 122446 - 123849 | 49620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.