Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. Leaf216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755576 bp
Thymine Count
1756181 bp
Guanine Count
1065701 bp
Cytosine Count
1102433 bp
Genome Length
5680060 bp
Protein-coding Genes
4730 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 61 - 1587 | Not Available |
| hypothetical protein | ASE74_00010 | Not Available | - | 1852 - 2142 | 10331.0 |
| hypothetical protein | ASE74_00015 | Not Available | - | 2283 - 2492 | 7970.16 |
| hypothetical protein | ASE74_00020 | Not Available | + | 3008 - 4381 | 50193.8 |
| serine hydroxymethyltransferase | ASE74_00025 | A5FEF4 | - | 4625 - 5896 | 45797.5 |
| chromosome segregation protein scpa | ASE74_00030 | B2V486 | - | 5959 - 6702 | 28626.6 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ASE74_00035 | Q11NY7 | + | 6914 - 8842 | 70210.4 |
| gliding motility protein remb | ASE74_00040 | Not Available | - | 9274 - 10902 | 61661.7 |
| undecaprenyl-phosphate glucose phosphotransferase | ASE74_00045 | Q48460 | - | 11010 - 12401 | 54047.2 |
| mannose-1-phosphate guanylyltransferase | ASE74_00050 | Not Available | - | 12662 - 13759 | 40820.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.