Candidatus Desulfovibrio trichonymphae

Coccus

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

"Candidatus Desulfovibrio trichonymphae" is a coccus-shaped microbe that is symbiotically associated with protist cells, particularly within the digestive tracts of termites. This unique association highlights its adaptation to a specific niche where it likely plays a role in the degradation of complex organic matter. As a member of the Desulfovibrio genus, "Candidatus Desulfovibrio trichonymphae" is presumed to be involved in anaerobic metabolic processes, although specific metabolic pathways have not been detailed. The coccus morphology suggests a potential for varying arrangements that could influence its interactions within the host environment. Its presence within protist cells indicates a mutualistic relationship, where it may assist in the digestion of cellulose or other substrates, thereby contributing to the overall metabolic efficiency of its host. The ecological significance of "Candidatus Desulfovibrio trichonymphae" lies in its role in the termite gut microbiome, which is crucial for nutrient cycling and energy flow within terrestrial ecosystems. This symbiotic relationship underscores the complexity and interdependence of microbial life and host organisms, reflecting broader ecological processes that facilitate organic matter breakdown and nutrient availability in the environment. Understanding this microbe's specific interactions and functions could provide insights into the dynamics of microbial communities in similar symbiotic systems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesCandidatus Desulfovibrio trichonymphae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCoccus
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatprotist cell
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Desulfovibrio trichonymphae


Gene Summary

Adenine Count

320101 bp

Thymine Count

316987 bp

Guanine Count

385101 bp

Cytosine Count

387867 bp

Genome Length

1410056 bp

Protein-coding Genes

1338 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dnaa atpase domain-containing proteinRSDT_RS00005Not Available+1 - 141351905.8
prephenate dehydrogenase/arogenate dehydrogenase family proteinRSDT_RS00010Not Available-1423 - 220228661.7
3-phosphoshikimate 1-carboxyvinyltransferaseRSDT_RS00015Not Available-2199 - 359049602.6
prephenate dehydrataseRSDT_RS00020Not Available-3587 - 480743909.2
3-dehydroquinate synthase ii family proteinRSDT_RS00025Not Available-4812 - 579535114.3
2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthaseRSDT_RS00030Not Available-5797 - 659428043.2
signal recognition particle proteinRSDT_RS00035Not Available-7279 - 874853002.4
ntp transferase domain-containing proteinRSDT_RS00040Not Available-8974 - 962123136.2
selenium cofactor biosynthesis protein yqecRSDT_RS00045Not Available-9588 - 1037627536.4
Trna-metNot AvailableNot Available+11024 - 11099Not Available

Displaying genes 1 – 10 of 1397 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites