Shewanella sp. P1-14-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sp. P1-14-1 is characterized by the presence of flagella, which suggests a degree of motility that may be crucial for its survival and ecological interactions. This motility can facilitate the organism's ability to explore its environment, access nutrients, and evade predators. The bacterium has a single replicon, indicating a streamlined genomic organization that could contribute to efficient replication and possibly adaptation to its ecological niche. The genomic information for Shewanella sp. P1-14-1 is cataloged under the accession number LKTL00000000.1, which allows for further exploration of its genetic makeup and functional capabilities. Understanding the genetic structure can provide insights into the metabolic pathways and ecological roles of this organism. Ecologically, Shewanella species are known for their versatility in utilizing various electron acceptors, which positions them as important players in biogeochemical cycles, particularly in anaerobic environments. The flagellar motility may enhance their ability to colonize diverse habitats, including sediment and biofilms, where they can interact with other microorganisms and contribute to nutrient cycling. Therefore, Shewanella sp. P1-14-1 not only exemplifies the adaptive traits of the genus but also highlights the complex interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sp. P1-14-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sp. P1-14-1


Gene Summary

Adenine Count

1469692 bp

Thymine Count

1441306 bp

Guanine Count

975124 bp

Cytosine Count

1030294 bp

Genome Length

4916416 bp

Protein-coding Genes

4159 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAN944_00036Not AvailablePositive40915 - 4136716528.5
na(+)/h(+) antiporter subunit eAN944_00037Not AvailablePositive41448 - 4194818692.9
putative monovalent cation/h+ antiporter subunit fAN944_00038Not AvailablePositive41948 - 4224410822.7
na(+)/h(+) antiporter subunit gAN944_00039O58672Positive42241 - 4258211893.1
na(+)/h(+) antiporter subunit bAN944_00040Not AvailablePositive42609 - 4360435783.4
na(+)/h(+) antiporter subunit c1AN944_00041Q4L4W5Positive43585 - 4394713262.5
na(+)/h(+) antiporter subunit dAN944_00042B1I6I5Positive43947 - 4542553688.5
na(+)/h(+) antiporter subunit d1AN944_00043Not AvailablePositive45422 - 4691253364.0
hypothetical proteinAN944_00044Not AvailablePositive46902 - 4725213474.2
na(+)/h(+) antiporter subunit aAN944_00045Q9RGZ5Positive47239 - 4893962135.0

Displaying genes 41 – 50 of 4243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

227 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 227 metabolites

Health Effects

No health effects information available for this bacterium.