Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio indicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudodesulfovibrio indicus str. J2
Accession NumberNZ_CP014206.1
Gene Summary
Adenine Count
723863 bp
Thymine Count
724398 bp
Guanine Count
1261771 bp
Cytosine Count
1256541 bp
Genome Length
3966573 bp
Protein-coding Genes
3594 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase cas3' | AWY79_RS16050 | O27158 | - | 3509614 - 3511767 | 79854.3 |
| fructose-6-phosphate aldolase | AWY79_RS16055 | C6C0W4 | - | 3512404 - 3513048 | 23266.2 |
| l-ribulose-5-phosphate 4-epimerase arad | AWY79_RS16060 | Q9S469 | - | 3513136 - 3513828 | 25138.9 |
| ribulokinase | AWY79_RS16065 | A6T4K1 | - | 3513832 - 3515508 | 59831.2 |
| l-arabinose isomerase | AWY79_RS16070 | A9B689 | - | 3515533 - 3517014 | 54668.7 |
| laci family dna-binding transcriptional regulator | AWY79_RS16075 | P46828 | + | 3517226 - 3518272 | 38137.7 |
| had family phosphatase | AWY79_RS16080 | P77475 | + | 3518275 - 3518937 | 23657.5 |
| atp-binding protein | AWY79_RS16085 | Q9CL63 | - | 3518952 - 3520808 | 68959.3 |
| sigma-54 dependent transcriptional regulator | AWY79_RS16090 | Not Available | - | 3520801 - 3522138 | 49670.3 |
| abc transporter substrate-binding protein | AWY79_RS16095 | P39325 | + | 3522602 - 3523582 | 35607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.