Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio indicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudodesulfovibrio indicus str. J2
Accession NumberNZ_CP014206.1
Gene Summary
Adenine Count
723863 bp
Thymine Count
724398 bp
Guanine Count
1261771 bp
Cytosine Count
1256541 bp
Genome Length
3966573 bp
Protein-coding Genes
3594 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/oxoprolinase family protein | AWY79_RS16000 | Q01262 | + | 3496271 - 3498268 | 70809.5 |
| cache domain-containing protein | AWY79_RS16005 | Q99TZ9 | - | 3498273 - 3501599 | 123686.0 |
| Trna-thr | Not Available | Not Available | + | 3501853 - 3501928 | Not Available |
| shufflon-specific dna recombinase | AWY79_RS16015 | Not Available | + | 3502029 - 3502547 | 20033.2 |
| crispr-associated endonuclease cas2 | AWY79_RS16020 | Q72WF4 | - | 3504375 - 3504668 | 11620.7 |
| type i-c crispr-associated endonuclease cas1c | AWY79_RS16025 | Q8KDC4 | - | 3504672 - 3505703 | 38135.4 |
| crispr-associated protein cas4 | AWY79_RS16030 | Not Available | - | 3505703 - 3506311 | 22467.3 |
| type i-c crispr-associated protein cas7/csd2 | AWY79_RS16035 | D4GQN6 | - | 3506314 - 3507189 | 31958.8 |
| type i-c crispr-associated protein cas8c/csd1 | AWY79_RS16040 | Not Available | - | 3507193 - 3508932 | 64374.8 |
| type i-c crispr-associated protein cas5c | AWY79_RS16045 | Q65TW5 | - | 3508929 - 3509588 | 25007.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.