Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio indicus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudodesulfovibrio indicus str. J2
Accession NumberNZ_CP014206.1
Gene Summary
Adenine Count
723863 bp
Thymine Count
724398 bp
Guanine Count
1261771 bp
Cytosine Count
1256541 bp
Genome Length
3966573 bp
Protein-coding Genes
3594 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | AWY79_RS05850 | C6BYG5 | - | 1256989 - 1258383 | 50456.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | AWY79_RS05855 | C6BYG6 | - | 1258446 - 1259516 | 37147.1 |
| putative lipid ii flippase ftsw | AWY79_RS05860 | B3E3Y3 | - | 1259519 - 1260640 | 40550.7 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | AWY79_RS05865 | Q313Q5 | - | 1260633 - 1261985 | 49060.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | AWY79_RS05870 | C6BYG9 | - | 1261990 - 1263066 | 39120.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | AWY79_RS05875 | P11880 | - | 1263063 - 1264451 | 49198.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | AWY79_RS05880 | Q1MPC4 | - | 1264448 - 1265971 | 55872.4 |
| penicillin-binding transpeptidase domain-containing protein | AWY79_RS05885 | G3XD46 | - | 1265946 - 1267907 | 71260.2 |
| hypothetical protein | AWY79_RS05890 | Not Available | - | 1267959 - 1268240 | 10384.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | AWY79_RS05895 | C6BYH4 | - | 1268240 - 1269217 | 35771.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.