Omnitrophica WOR_2 bacterium SM23_72

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Omnitrophica WOR_2 bacterium SM23_72


Gene Summary

Adenine Count

749723 bp

Thymine Count

753684 bp

Guanine Count

607877 bp

Cytosine Count

619175 bp

Genome Length

2730459 bp

Protein-coding Genes

2514 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAMJ95_00005Not Available+1 - 96637886.5
hypothetical proteinAMJ95_00010Not Available+985 - 137114550.5
hypothetical proteinAMJ95_00015O31502+1374 - 226732185.4
hypothetical proteinAMJ95_00020Not Available+2321 - 275816481.9
hypothetical proteinAMJ95_00025Not Available+2755 - 333021319.1
hypothetical proteinAMJ95_00030Not Available+3346 - 430837443.6
carbamoyl phosphate synthase large subunitAMJ95_00035O28994+4491 - 7721120525.0
exsb family transcriptional regulatorAMJ95_00040Not Available+7758 - 872635585.1
hypothetical proteinAMJ95_00050P44790+9311 - 989222330.7
hypothetical proteinAMJ95_00055Not Available+9882 - 1037019022.0

Displaying genes 1 – 10 of 2585 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

121 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 121 metabolites