Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_00010 | Not Available | - | 94 - 372 | 10189.1 |
| 16s ribosomal rna | Not Available | Not Available | + | 578 - 2044 | Not Available |
| hypothetical protein | AVO44_00015 | Not Available | - | 372 - 1262 | 32327.9 |
| queuine trna-ribosyltransferase | AVO44_00020 | Not Available | + | 1562 - 2692 | 41693.1 |
| 23s ribosomal rna | Not Available | Not Available | + | 2987 - 5862 | Not Available |
| dna-binding protein | AVO44_00025 | Not Available | + | 3060 - 5468 | 88404.5 |
| Trna-val | Not Available | Not Available | + | 5732 - 5806 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 6129 - 6243 | Not Available |
| hypothetical protein | AVO44_00035 | Not Available | - | 5931 - 7865 | 66736.2 |
| Trna-asp | Not Available | Not Available | + | 8410 - 8486 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.