Novosphingobium sp. ST904

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. ST904
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. ST904

LGJH00000000.1

Gene Summary

Adenine Count

1115046 bp

Thymine Count

1111785 bp

Guanine Count

2022901 bp

Cytosine Count

2019731 bp

Genome Length

6269463 bp

Protein-coding Genes

4545 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp79ADT71_03835Not Available+756736 - 75846062755.4
Portal-like proteinADT71_03840Not Available+758493 - 75977346612.0
Putative prohead proteaseADT71_03845Not Available+759779 - 76047125049.8
Major capsid proteinADT71_03850Not Available+760538 - 76177944880.4
hypothetical proteinADT71_03855Not Available+761795 - 76217513817.2
Dna packaging/head-tail-connectorADT71_03860Not Available+762178 - 76275020677.6
Putative transcriptional regulatorADT71_08640Not Available-1816495 - 181714823680.6
hypothetical proteinADT71_08645Not Available+1817246 - 18174527388.98
hypothetical proteinADT71_08650P61605+1817449 - 181776311565.0
Dna adenine methyltransferaseADT71_08655Not Available+1817767 - 181860031318.1

Displaying genes 11 – 20 of 4664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

313 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000338(1R,4R,5R)-5-hydroxycamphorC10H16O2Chemical structure of (1R,4R,5R)-5-hydroxycamphorNot available
Average168.2328Da
Monoisotopic168.115029756Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 313 metabolites