Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax gossypii str. DSM 100435
Accession NumberRXOE00000000.1
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | EJP69_05345 | Not Available | - | 1135264 - 1136574 | 48032.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EJP69_05350 | Not Available | - | 1136590 - 1137876 | 46141.5 |
| helix-turn-helix domain-containing protein | EJP69_05355 | Not Available | - | 1137873 - 1138838 | 32538.0 |
| type iv pilus biogenesis/stability protein pilw | EJP69_05360 | Not Available | - | 1138831 - 1139688 | 31470.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EJP69_05365 | Not Available | - | 1139693 - 1140844 | 42571.2 |
| nucleoside-diphosphate kinase | EJP69_05370 | Not Available | - | 1140867 - 1141292 | 15235.3 |
| rrna pseudouridine synthase | EJP69_05375 | Not Available | - | 1141446 - 1143257 | 65029.1 |
| smc-scp complex subunit scpb | EJP69_05380 | Not Available | - | 1143254 - 1144228 | 34561.1 |
| rlua family pseudouridine synthase | EJP69_05385 | Not Available | - | 1144358 - 1145374 | 36836.2 |
| outer membrane protein assembly factor bamd | EJP69_05390 | Not Available | + | 1145407 - 1146216 | 30164.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.