Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Spongiibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Spongiibacter |
| Species | Spongiibacter sp. IMCC21906 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Spongiibacter sp. IMCC21906
Accession NumberNZ_CP011478.1
Gene Summary
Adenine Count
3328 bp
Thymine Count
3032 bp
Guanine Count
2814 bp
Cytosine Count
3511 bp
Genome Length
12685 bp
Protein-coding Genes
15 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | IMCC21906_RS02140 | Not Available | - | 479075 - 480526 | 52596.4 |
| trk system potassium transporter trka | IMCC21906_RS02145 | Not Available | - | 480562 - 481935 | 49946.2 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | IMCC21906_RS02150 | Not Available | - | 481998 - 483302 | 47464.9 |
| methionyl-trna formyltransferase | IMCC21906_RS02155 | Not Available | - | 483299 - 484261 | 34101.8 |
| peptide deformylase | IMCC21906_RS02160 | Not Available | - | 484277 - 484783 | 19375.2 |
| lysm peptidoglycan-binding domain-containing protein | IMCC21906_RS02165 | Not Available | + | 484983 - 486011 | 37510.2 |
| dna-processing protein dpra | IMCC21906_RS02170 | Not Available | + | 486084 - 487172 | 38703.8 |
| l-threonylcarbamoyladenylate synthase | IMCC21906_RS02175 | Not Available | + | 487299 - 487868 | 20837.0 |
| oxygen-dependent coproporphyrinogen oxidase | IMCC21906_RS02180 | Not Available | + | 487912 - 488808 | 34509.6 |
| shikimate dehydrogenase | IMCC21906_RS02185 | Not Available | + | 488850 - 489677 | 30031.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.