Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_10381 | Not Available | - | 1006640 - 1007005 | 14358.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06296052_10382 | Not Available | - | 1007064 - 1007417 | 13675.5 |
| comf family protein | SAMN06296052_10383 | Not Available | + | 1007508 - 1008200 | 25925.4 |
| alpha/beta hydrolase fold | SAMN06296052_10384 | Not Available | - | 1008256 - 1008594 | 12804.4 |
| protein of unknown function | SAMN06296052_10385 | Not Available | - | 1008603 - 1009082 | 18233.3 |
| gliding motility-associated lipoprotein gldj/gliding motility-associated lipoprotein gldj,tigr03530 | SAMN06296052_10386 | Not Available | - | 1009166 - 1010398 | 45676.9 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06296052_10387 | Not Available | - | 1010461 - 1011474 | 37123.0 |
| asma family protein | SAMN06296052_10388 | Not Available | + | 1011624 - 1014644 | 109711.0 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN06296052_10389 | Not Available | - | 1014846 - 1015322 | 18153.4 |
| hypothetical protein | SAMN06296052_10390 | Not Available | - | 1015324 - 1015713 | 14457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.