Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06296052_102243 | Not Available | - | 727142 - 730264 | 118531.0 |
| dna polymerase iii, delta subunit | SAMN06296052_102244 | Not Available | - | 730507 - 731553 | 39301.9 |
| hypothetical protein | SAMN06296052_102245 | Not Available | + | 731802 - 732971 | 43969.4 |
| tyrosyl-trna synthetase | SAMN06296052_102246 | Not Available | + | 733291 - 734595 | 48493.9 |
| histone h1-like protein hc1 | SAMN06296052_102247 | Not Available | - | 734673 - 734864 | 7227.59 |
| glycine c-acetyltransferase | SAMN06296052_102248 | Not Available | - | 734971 - 736188 | 44726.9 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN06296052_102249 | Not Available | + | 736413 - 737918 | 55175.3 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN06296052_102250 | Not Available | - | 738036 - 738755 | 26824.1 |
| lysm domain-containing protein | SAMN06296052_102251 | Not Available | - | 738773 - 739906 | 42377.3 |
| thioredoxin reductase (nadph) | SAMN06296052_102252 | Not Available | - | 739961 - 740899 | 33817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.