Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| geranylgeranyl diphosphate synthase, type ii | SAMN06296052_10361 | Not Available | - | 973049 - 974023 | 36555.2 |
| rnase r | SAMN06296052_10362 | Not Available | - | 974031 - 976310 | 86922.5 |
| peptide/nickel transport system atp-binding protein | SAMN06296052_10363 | Not Available | - | 976537 - 978423 | 69827.8 |
| 2-haloacid dehalogenase | SAMN06296052_10364 | Not Available | + | 978553 - 979158 | 23517.8 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN06296052_10365 | Not Available | - | 979379 - 980005 | 23614.2 |
| isoleucyl-trna synthetase | SAMN06296052_10366 | Not Available | - | 980115 - 983468 | 128427.0 |
| hypothetical protein | SAMN06296052_10367 | Not Available | - | 983449 - 985950 | 93853.3 |
| mechanosensitive ion channel | SAMN06296052_10368 | Not Available | - | 987134 - 988795 | 62463.5 |
| glycyl-trna synthetase | SAMN06296052_10369 | Not Available | - | 989077 - 990576 | 57694.6 |
| phosphate/sulfate permease | SAMN06296052_10370 | Not Available | + | 990815 - 991948 | 42851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.