Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | SAMN06296052_10321 | Not Available | + | 930322 - 931863 | 58670.4 |
| hypothetical protein | SAMN06296052_10322 | Not Available | + | 931995 - 932366 | 14486.2 |
| tigr00266 family protein | SAMN06296052_10323 | Not Available | + | 932495 - 933262 | 27633.3 |
| gh3 auxin-responsive promoter | SAMN06296052_10324 | Not Available | - | 933681 - 935159 | 56383.5 |
| lipopolysaccharide export system atp-binding protein | SAMN06296052_10325 | Not Available | - | 935211 - 935960 | 27958.2 |
| lysozyme | SAMN06296052_10326 | Not Available | + | 936140 - 936955 | 31284.3 |
| exonuclease recj | SAMN06296052_10327 | Not Available | - | 937060 - 938766 | 63510.4 |
| tetratricopeptide repeat-containing protein | SAMN06296052_10328 | Not Available | - | 939019 - 940833 | 69590.1 |
| hypothetical protein | SAMN06296052_10329 | Not Available | + | 940869 - 941096 | 8585.84 |
| peptidyl-prolyl cis-trans isomerase d | SAMN06296052_10330 | Not Available | - | 941068 - 943179 | 77035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.