Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts2 | SAMN06296052_102383 | Not Available | - | 879909 - 882302 | 89486.8 |
| yhch/yjgk/yial family protein | SAMN06296052_102384 | Not Available | + | 882442 - 882891 | 16810.1 |
| hypothetical protein | SAMN06296052_102385 | Not Available | + | 883182 - 883370 | 6996.37 |
| putative efflux protein, mate family | SAMN06296052_102386 | Not Available | + | 883489 - 884883 | 50158.9 |
| ribosomal protein s18 acetylase rimi | SAMN06296052_102387 | Not Available | + | 884918 - 885397 | 18099.7 |
| tigr02757 family protein | SAMN06296052_102388 | Not Available | - | 885541 - 886362 | 32191.7 |
| hypothetical protein | SAMN06296052_102389 | Not Available | - | 886396 - 887118 | 26932.7 |
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN06296052_102390 | Not Available | - | 887305 - 888087 | 28922.8 |
| atp-dependent dna helicase recq | SAMN06296052_102391 | Not Available | - | 888239 - 890374 | 80367.0 |
| hypothetical protein | SAMN06296052_102392 | Not Available | + | 890536 - 890871 | 12675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.