Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rare lipoprotein a | SAMN06296052_102363 | Not Available | - | 859935 - 860351 | 15411.4 |
| protein of unknown function | SAMN06296052_102364 | Not Available | + | 860485 - 860820 | 13093.1 |
| hypothetical protein | SAMN06296052_102365 | Not Available | + | 861159 - 862256 | 40353.4 |
| protein of unknown function | SAMN06296052_102366 | Not Available | - | 862368 - 863720 | 51108.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06296052_102367 | Not Available | + | 863849 - 864712 | 31071.8 |
| putative redox protein | SAMN06296052_102368 | Not Available | - | 864716 - 865162 | 16315.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06296052_102369 | Not Available | - | 865235 - 866590 | 51446.7 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06296052_102370 | Not Available | - | 866580 - 867965 | 52297.0 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN06296052_102371 | Not Available | + | 868356 - 870764 | 89637.6 |
| pp_00769 | SAMN06296052_102372 | Not Available | + | 870918 - 871274 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.