Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. As a heterotrophic organism, it derives its energy from organic compounds, necessitating the presence of other carbon sources for growth. This microbe displays an aerobic metabolism, requiring oxygen for its metabolic processes. The morphological characteristics of P. ummariensis, combined with its physiological traits, suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of organic material in its environment. Such bacteria are commonly found in diverse habitats, including soil and aquatic systems, where they may influence nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions implies that P. ummariensis could participate in processes such as the oxidation of organic substrates, potentially impacting the dynamics of microbial communities in oxygen-rich environments. Understanding the ecological role of Pontibacter ummariensis may provide insights into its contribution to biogeochemical cycles, particularly in regions where organic material is abundant and oxygen levels are sufficient to support aerobic microbial life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis

Accession NumberFZOQ00000000.1

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative intracellular protease/amidaseSAMN06296052_102303Not Available-799891 - 80057124268.6
glucose/arabinose dehydrogenase, beta-propeller foldSAMN06296052_102304Not Available-800783 - 80210247966.9
short-chain dehydrogenaseSAMN06296052_102305Not Available-802135 - 80297129967.8
dna polymerase-4SAMN06296052_102306Not Available+803166 - 80420938951.8
hypothetical proteinSAMN06296052_102307Not Available+804419 - 80526731294.2
hypothetical proteinSAMN06296052_102308Not Available+805338 - 80570012765.8
membrane-associated proteinSAMN06296052_102309Not Available+805824 - 80647724841.4
kup system potassium uptake proteinSAMN06296052_102310Not Available+806504 - 80844172133.2
amino acid/polyamine/organocation transporter, apc superfamilySAMN06296052_102311Not Available+808519 - 81027663291.6
hypothetical proteinSAMN06296052_102312Not Available+810215 - 81064915956.8

Displaying genes 771 – 780 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites