Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN06296052_102293 | Not Available | - | 785603 - 787282 | 63287.1 |
| protein of unknown function | SAMN06296052_102294 | Not Available | + | 787974 - 790421 | 90452.2 |
| phosphoserine phosphatase | SAMN06296052_102295 | Not Available | + | 791241 - 791873 | 24622.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN06296052_102296 | Not Available | + | 792133 - 793077 | 34522.7 |
| quinoprotein glucose dehydrogenase | SAMN06296052_102297 | Not Available | + | 793334 - 795574 | 81631.7 |
| hypothetical protein | SAMN06296052_102298 | Not Available | - | 795470 - 795670 | 7373.17 |
| heat shock protein hsp20 | SAMN06296052_102299 | Not Available | + | 795759 - 796280 | 19938.6 |
| ribosomal large subunit pseudouridine synthase f | SAMN06296052_102300 | Not Available | + | 796494 - 797435 | 34185.9 |
| hypothetical protein | SAMN06296052_102301 | Not Available | - | 797617 - 798471 | 31670.9 |
| cysteine synthase b | SAMN06296052_102302 | Not Available | - | 798779 - 799669 | 32386.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.