Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase | SAMN06296052_102273 | Not Available | + | 764213 - 765388 | 43222.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN06296052_102274 | Not Available | + | 765441 - 767183 | 63550.0 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN06296052_102275 | Not Available | + | 767541 - 768011 | 17538.8 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN06296052_102276 | Not Available | + | 768159 - 768605 | 16927.1 |
| o-succinylbenzoic acid--coa ligase | SAMN06296052_102277 | Not Available | + | 768995 - 770107 | 41680.3 |
| sugar lactone lactonase yvre | SAMN06296052_102278 | Not Available | + | 770170 - 771045 | 32664.5 |
| protein of unknown function | SAMN06296052_102279 | Not Available | + | 771115 - 772053 | 35733.9 |
| hypothetical protein | SAMN06296052_102280 | Not Available | + | 772108 - 772503 | 14911.1 |
| formiminoglutamase | SAMN06296052_102281 | Not Available | - | 772624 - 773598 | 35252.9 |
| imidazolonepropionase | SAMN06296052_102282 | Not Available | - | 773638 - 774915 | 46093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.