Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein | SAMN06296052_102163 | Not Available | + | 643135 - 644256 | 40450.1 |
| cation diffusion facilitator family transporter | SAMN06296052_102164 | Not Available | - | 644304 - 645308 | 37260.7 |
| putative endonuclease | SAMN06296052_102165 | Not Available | - | 645609 - 645920 | 11621.5 |
| hypothetical protein | SAMN06296052_102166 | Not Available | + | 646277 - 646537 | 9975.03 |
| hypothetical protein | SAMN06296052_102167 | Not Available | - | 646543 - 646743 | 7974.56 |
| trna pseudouridine synthase c | SAMN06296052_102168 | Not Available | + | 646886 - 647695 | 30879.0 |
| hypothetical protein | SAMN06296052_102169 | Not Available | - | 647622 - 647975 | 13507.3 |
| curved dna-binding protein | SAMN06296052_102170 | Not Available | - | 648013 - 648954 | 34033.3 |
| glutamine cyclotransferase | SAMN06296052_102171 | Not Available | + | 649033 - 650091 | 39598.1 |
| uncharacterized membrane protein yqae, homolog of blt101, upf0057 family | SAMN06296052_102172 | Not Available | - | 650165 - 650782 | 22473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.