Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN06296052_102143 | Not Available | - | 619230 - 619919 | 24992.8 |
| acyl-coa thioesterase-1 | SAMN06296052_102144 | Not Available | + | 620080 - 620793 | 26150.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06296052_102145 | Not Available | + | 621323 - 621856 | 19904.0 |
| hypothetical protein | SAMN06296052_102146 | Not Available | + | 621870 - 622778 | 32848.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_102147 | Not Available | + | 622791 - 623903 | 41940.5 |
| rna methyltransferase, trmh family | SAMN06296052_102148 | Not Available | - | 623953 - 624699 | 27464.1 |
| outer membrane protein assembly factor bama | SAMN06296052_102149 | Not Available | + | 624748 - 627138 | 91072.8 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN06296052_102150 | Not Available | - | 627276 - 629354 | 75875.1 |
| coproporphyrinogen oxidase | SAMN06296052_102151 | Not Available | + | 629598 - 630470 | 33086.1 |
| undecaprenyl-diphosphatase | SAMN06296052_102152 | Not Available | + | 630478 - 631050 | 21626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.