Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | SAMN06296052_102133 | Not Available | - | 607051 - 607443 | 15046.2 |
| hypothetical protein | SAMN06296052_102134 | Not Available | + | 607670 - 608245 | 20872.2 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN06296052_102135 | Not Available | - | 608295 - 609284 | 36912.8 |
| hlyd family secretion protein | SAMN06296052_102136 | Not Available | - | 609299 - 610681 | 50189.4 |
| outer membrane protein | SAMN06296052_102137 | Not Available | - | 610687 - 612144 | 53959.8 |
| l-serine dehydratase | SAMN06296052_102138 | Not Available | - | 612157 - 612834 | 24440.2 |
| tryptophan 2,3-dioxygenase apoenzyme | SAMN06296052_102139 | Not Available | + | 613155 - 614120 | 38113.0 |
| hypothetical protein | SAMN06296052_102140 | Not Available | + | 614243 - 615826 | 58134.9 |
| hypothetical protein | SAMN06296052_102141 | Not Available | + | 615951 - 616313 | 13574.2 |
| putative abc transport system permease protein | SAMN06296052_102142 | Not Available | - | 616583 - 619102 | 91937.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.