Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide kinase | SAMN06296052_10273 | Not Available | + | 539263 - 540333 | 39680.1 |
| putative porin | SAMN06296052_10274 | Not Available | + | 540379 - 542301 | 74810.6 |
| pp_00475 | SAMN06296052_10275 | Not Available | + | 542355 - 542963 | Not Available |
| hypothetical protein | SAMN06296052_10276 | Not Available | - | 543111 - 544376 | 48141.2 |
| putative abc transport system permease protein | SAMN06296052_10277 | Not Available | + | 544507 - 545748 | 45149.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06296052_10278 | Not Available | - | 545831 - 546445 | 22470.2 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN06296052_10279 | Not Available | - | 546511 - 547830 | 49973.6 |
| phosphoglycerol transferase mdob | SAMN06296052_10280 | Not Available | - | 547986 - 549812 | 68805.4 |
| glutamine synthetase | SAMN06296052_10281 | Not Available | + | 550095 - 552287 | 82193.9 |
| hypothetical protein | SAMN06296052_10282 | Not Available | - | 552405 - 552785 | 14347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.