Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN06296052_13716 | Not Available | - | 5555063 - 5555332 | 9554.71 |
| atp-binding protein involved in chromosome partitioning | SAMN06296052_13717 | Not Available | - | 5555339 - 5556442 | 38957.3 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN06296052_13718 | Not Available | + | 5556799 - 5557335 | 18858.5 |
| dna primase | SAMN06296052_13719 | Not Available | + | 5557624 - 5559543 | 72481.6 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMN06296052_13720 | Not Available | + | 5560163 - 5561410 | 45574.2 |
| hypothetical protein | SAMN06296052_13721 | Not Available | + | 5561614 - 5562369 | 29144.7 |
| protein of unknown function | SAMN06296052_13722 | Not Available | - | 5562523 - 5563242 | 27725.7 |
| phosphoglycolate phosphatase | SAMN06296052_13723 | Not Available | + | 5563498 - 5564133 | 24138.5 |
| putative zincin peptidase | SAMN06296052_13724 | Not Available | + | 5564158 - 5564748 | 21894.5 |
| membrane dipeptidase | SAMN06296052_13725 | Not Available | + | 5564915 - 5566120 | 44461.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.