Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mn-containing catalase | SAMN06296052_1362 | Not Available | - | 5499585 - 5500532 | 35362.0 |
| alpha-l-fucosidase 2 | SAMN06296052_1363 | Not Available | + | 5500915 - 5503269 | 87297.7 |
| lysophospholipase l1 | SAMN06296052_1364 | Not Available | + | 5503382 - 5504509 | 42947.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_1365 | Not Available | - | 5504655 - 5507081 | 90093.2 |
| hypothetical protein | SAMN06296052_1366 | Not Available | + | 5507181 - 5507315 | 5135.39 |
| histidine kinase | SAMN06296052_1367 | Not Available | + | 5507407 - 5508465 | 40593.9 |
| two component transcriptional regulator, lyttr family | SAMN06296052_1368 | Not Available | + | 5508479 - 5509243 | 28853.8 |
| peroxiredoxin | SAMN06296052_1369 | Not Available | + | 5509330 - 5510523 | 44330.4 |
| uncharacterized membrane protein | SAMN06296052_13610 | Not Available | + | 5510748 - 5511221 | 16509.1 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06296052_13611 | Not Available | + | 5511609 - 5512775 | 43015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.