Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acylglucosamine 2-epimerase | SAMN06296052_13512 | Not Available | - | 5479436 - 5480620 | 46202.9 |
| sialate o-acetylesterase | SAMN06296052_13513 | Not Available | - | 5480634 - 5482619 | 74318.3 |
| sialidase-1 | SAMN06296052_13514 | Not Available | - | 5482778 - 5484316 | 56196.4 |
| cyclically-permuted mutarotase family protein | SAMN06296052_13515 | Not Available | - | 5484420 - 5487119 | 98595.6 |
| n-acetylneuraminate lyase | SAMN06296052_13516 | Not Available | - | 5487129 - 5488070 | 34582.8 |
| starch-binding associating with outer membrane | SAMN06296052_13517 | Not Available | - | 5488301 - 5489842 | 57220.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_13518 | Not Available | - | 5489867 - 5493184 | 121136.0 |
| dna-binding transcriptional regulator, fadr family | SAMN06296052_13519 | Not Available | + | 5493353 - 5494054 | 26712.8 |
| beta-galactosidase | SAMN06296052_13520 | Not Available | + | 5494749 - 5497907 | 121985.0 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN06296052_1361 | Not Available | - | 5498760 - 5499569 | 30791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.