Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump subunit acrb | SAMN06296052_13424 | Not Available | - | 5438871 - 5442281 | 125195.0 |
| rnd family efflux transporter, mfp subunit | SAMN06296052_13425 | Not Available | - | 5442301 - 5443449 | 42185.3 |
| outer membrane protein tolc | SAMN06296052_13426 | Not Available | - | 5443479 - 5444846 | 51183.9 |
| transcriptional regulator, tetr family | SAMN06296052_13427 | Not Available | - | 5444877 - 5445509 | 24699.2 |
| two component transcriptional regulator, lyttr family | SAMN06296052_13428 | Not Available | - | 5445783 - 5446526 | 28023.2 |
| histidine kinase | SAMN06296052_13429 | Not Available | - | 5446519 - 5447547 | 38981.7 |
| hypothetical protein | SAMN06296052_13430 | Not Available | - | 5447562 - 5448389 | 30360.8 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN06296052_13431 | Not Available | + | 5448914 - 5449978 | 40454.3 |
| rieske | SAMN06296052_13432 | Not Available | + | 5450108 - 5450602 | 17964.5 |
| Trna-asn | Not Available | Not Available | + | 5450739 - 5450815 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.