Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor 1 (eif-1/sui1) | SAMN06296052_13064 | Not Available | - | 5243364 - 5243711 | 12616.0 |
| lipid kinase, yegs/rv2252/bmru family | SAMN06296052_13065 | Not Available | - | 5243771 - 5244655 | 32163.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN06296052_13066 | Not Available | - | 5244756 - 5245616 | 32127.3 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN06296052_13067 | Not Available | - | 5245802 - 5246797 | 34923.9 |
| Trna-glu | Not Available | Not Available | + | 5246973 - 5247044 | Not Available |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_13069 | Not Available | + | 5247503 - 5251225 | 134665.0 |
| transposase, is4 family | SAMN06296052_13070 | Not Available | - | 5251787 - 5252164 | 14912.4 |
| trka-c domain-containing protein | SAMN06296052_1311 | Not Available | + | 5252165 - 5252461 | 10780.0 |
| hypothetical protein | SAMN06296052_1312 | Not Available | - | 5252717 - 5252914 | 7383.22 |
| 5'-nucleotidase | SAMN06296052_1313 | Not Available | - | 5253105 - 5254754 | 61286.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.