Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | SAMN06296052_13054 | Not Available | + | 5233385 - 5234818 | 51962.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN06296052_13055 | Not Available | + | 5234824 - 5235846 | 37497.5 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN06296052_13056 | Not Available | + | 5235914 - 5236474 | 21802.1 |
| lsu ribosomal protein l32p | SAMN06296052_13057 | Not Available | + | 5236525 - 5236722 | 7596.16 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN06296052_13058 | Not Available | + | 5236794 - 5237714 | 32537.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN06296052_13059 | Not Available | + | 5237848 - 5238846 | 35993.2 |
| lysm repeat-containing protein | SAMN06296052_13060 | Not Available | - | 5238988 - 5239923 | 33930.1 |
| protein of unknown function | SAMN06296052_13061 | Not Available | - | 5239933 - 5240709 | 28534.0 |
| membrane-bound serine protease (clpp class) | SAMN06296052_13062 | Not Available | + | 5240809 - 5242161 | 48472.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN06296052_13063 | Not Available | + | 5242268 - 5243002 | 28107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.