Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 5216539 - 5216626 | Not Available |
| asparaginase | SAMN06296052_13035 | Not Available | - | 5216692 - 5217759 | 39364.7 |
| tatd dnase family protein | SAMN06296052_13036 | Not Available | - | 5217762 - 5218529 | 28729.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN06296052_13037 | Not Available | - | 5218779 - 5219870 | 41746.7 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06296052_13038 | Not Available | - | 5219867 - 5220499 | 24459.3 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN06296052_13039 | Not Available | - | 5220610 - 5221863 | 48011.2 |
| hypothetical protein | SAMN06296052_13040 | Not Available | - | 5222289 - 5222546 | 9731.42 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN06296052_13041 | Not Available | - | 5222560 - 5223693 | 43287.4 |
| lysylphosphatidylglycerol synthase tm region | SAMN06296052_13042 | Not Available | - | 5223690 - 5224652 | 35368.9 |
| holliday junction endonuclease ruvc | SAMN06296052_13043 | Not Available | + | 5224708 - 5225280 | 20788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.