Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. As a heterotrophic organism, it derives its energy from organic compounds, necessitating the presence of other carbon sources for growth. This microbe displays an aerobic metabolism, requiring oxygen for its metabolic processes. The morphological characteristics of P. ummariensis, combined with its physiological traits, suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of organic material in its environment. Such bacteria are commonly found in diverse habitats, including soil and aquatic systems, where they may influence nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions implies that P. ummariensis could participate in processes such as the oxidation of organic substrates, potentially impacting the dynamics of microbial communities in oxygen-rich environments. Understanding the ecological role of Pontibacter ummariensis may provide insights into its contribution to biogeochemical cycles, particularly in regions where organic material is abundant and oxygen levels are sufficient to support aerobic microbial life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis

Accession NumberFZOQ00000000.1

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein tonbSAMN06296052_1291Not Available-5119774 - 512023516577.6
tonb family c-terminal domain-containing proteinSAMN06296052_1292Not Available-5120337 - 512180354819.7
predicted transcriptional regulatorSAMN06296052_1293Not Available-5121787 - 512218515364.3
hypothetical proteinSAMN06296052_1294Not Available+5122780 - 51229145135.43
tonb-linked outer membrane protein, susc/raga familySAMN06296052_1295Not Available+5123011 - 5125953106502.0
susd family proteinSAMN06296052_1296Not Available+5125971 - 512741052967.3
histidine phosphatase superfamily (branch 1)SAMN06296052_1297Not Available-5127568 - 512810120528.7
protein n-acetyltransferase, rimj/riml familySAMN06296052_1298Not Available-5128222 - 512887225219.0
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN06296052_1299Not Available+5129084 - 512978824560.6
dtdp-l-rhamnose 4-epimeraseSAMN06296052_12910Not Available+5129814 - 513093241169.2

Displaying genes 4431 – 4440 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites