Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein tonb | SAMN06296052_1291 | Not Available | - | 5119774 - 5120235 | 16577.6 |
| tonb family c-terminal domain-containing protein | SAMN06296052_1292 | Not Available | - | 5120337 - 5121803 | 54819.7 |
| predicted transcriptional regulator | SAMN06296052_1293 | Not Available | - | 5121787 - 5122185 | 15364.3 |
| hypothetical protein | SAMN06296052_1294 | Not Available | + | 5122780 - 5122914 | 5135.43 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_1295 | Not Available | + | 5123011 - 5125953 | 106502.0 |
| susd family protein | SAMN06296052_1296 | Not Available | + | 5125971 - 5127410 | 52967.3 |
| histidine phosphatase superfamily (branch 1) | SAMN06296052_1297 | Not Available | - | 5127568 - 5128101 | 20528.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN06296052_1298 | Not Available | - | 5128222 - 5128872 | 25219.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06296052_1299 | Not Available | + | 5129084 - 5129788 | 24560.6 |
| dtdp-l-rhamnose 4-epimerase | SAMN06296052_12910 | Not Available | + | 5129814 - 5130932 | 41169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.