Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN06296052_12839 | Not Available | + | 5092297 - 5093715 | 52752.2 |
| protein of unknown function | SAMN06296052_12840 | Not Available | + | 5093896 - 5094723 | 31017.0 |
| ribokinase | SAMN06296052_12841 | Not Available | + | 5094994 - 5095947 | 33555.9 |
| trehalose and maltose hydrolase (possible phosphorylase) | SAMN06296052_12842 | Not Available | + | 5095944 - 5098274 | 88617.7 |
| protein of unknown function | SAMN06296052_12843 | Not Available | + | 5098487 - 5099275 | 28221.4 |
| peptidase inhibitor i9 | SAMN06296052_12844 | Not Available | - | 5099738 - 5100970 | 42403.7 |
| hypothetical protein | SAMN06296052_12845 | Not Available | + | 5101427 - 5101660 | 8929.91 |
| l-2,4-diaminobutyrate decarboxylase | SAMN06296052_12846 | Not Available | - | 5102036 - 5103472 | 53496.8 |
| cystathionine beta-lyase | SAMN06296052_12847 | Not Available | - | 5103584 - 5104753 | 42793.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06296052_12848 | Not Available | - | 5104804 - 5105271 | 16388.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.