Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN06296052_1289 | Not Available | - | 5052632 - 5055034 | 89408.1 |
| penicillin-binding protein 1a | SAMN06296052_12810 | Not Available | + | 5055540 - 5057960 | 91476.9 |
| predicted dehydrogenase | SAMN06296052_12811 | Not Available | - | 5058156 - 5059307 | 42941.0 |
| d-tagatose 3-epimerase | SAMN06296052_12812 | Not Available | - | 5059440 - 5060324 | 32428.8 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN06296052_12813 | Not Available | - | 5060517 - 5064053 | 130643.0 |
| transcriptional regulator, arac family | SAMN06296052_12814 | Not Available | + | 5064180 - 5065058 | 33307.2 |
| hypothetical protein | SAMN06296052_12815 | Not Available | - | 5065137 - 5066678 | 55513.4 |
| sialate o-acetylesterase | SAMN06296052_12816 | Not Available | - | 5066706 - 5068673 | 72935.5 |
| nad(p)h-dependent fmn reductase | SAMN06296052_12817 | Not Available | - | 5069063 - 5069629 | 21574.1 |
| arac-type dna-binding protein | SAMN06296052_12818 | Not Available | - | 5069685 - 5070635 | 35666.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.