Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 2-selenouridine synthase | SAMN06296052_12716 | Not Available | + | 4981902 - 4982960 | 39515.4 |
| selenophosphate synthase | SAMN06296052_12717 | Not Available | + | 4982933 - 4983985 | 37298.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06296052_12718 | Not Available | + | 4984076 - 4984843 | 29161.0 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06296052_12719 | Not Available | + | 4985000 - 4985716 | 26647.4 |
| starch-binding associating with outer membrane | SAMN06296052_12720 | Not Available | - | 4985906 - 4987396 | 55175.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06296052_12721 | Not Available | - | 4987408 - 4990692 | 120424.0 |
| ferrous iron transport protein b | SAMN06296052_12722 | Not Available | - | 4991609 - 4993762 | 80016.4 |
| ferrous iron transport protein a | SAMN06296052_12723 | Not Available | - | 4993772 - 4994023 | 9172.34 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN06296052_12724 | Not Available | - | 4994253 - 4996718 | 90983.9 |
| chloramphenicol-sensitive protein rard | SAMN06296052_12725 | Not Available | + | 4996873 - 4997823 | 35367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.