Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06296052_12649 | Not Available | - | 4958838 - 4959245 | 15299.4 |
| hypothetical protein | SAMN06296052_12650 | Not Available | - | 4959255 - 4959800 | 20945.6 |
| hypothetical protein | SAMN06296052_12651 | Not Available | + | 4959885 - 4960061 | 6274.68 |
| pepsy-associated tm region | SAMN06296052_12652 | Not Available | - | 4959989 - 4960765 | 29192.2 |
| hypothetical protein | SAMN06296052_12653 | Not Available | + | 4961151 - 4967139 | 203897.0 |
| ribosomal large subunit pseudouridine synthase d | SAMN06296052_1271 | Not Available | - | 4967767 - 4968813 | 39356.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06296052_1272 | Not Available | - | 4968889 - 4969491 | 22077.4 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06296052_1273 | Not Available | - | 4969521 - 4970177 | 25294.2 |
| beta-barrel assembly machine subunit bama | SAMN06296052_1274 | Not Available | - | 4970193 - 4972679 | 93123.0 |
| undecaprenyl diphosphate synthase | SAMN06296052_1275 | Not Available | - | 4972691 - 4973434 | 28034.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.