Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_12629 | Not Available | + | 4925921 - 4927174 | 48463.4 |
| glycosyl transferases group 1 | SAMN06296052_12630 | Not Available | + | 4927171 - 4928382 | 46161.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_12631 | Not Available | + | 4928440 - 4929612 | 44299.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06296052_12632 | Not Available | + | 4929635 - 4930720 | 40514.3 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN06296052_12633 | Not Available | + | 4930805 - 4931377 | 20961.3 |
| colanic acid biosynthesis glycosyl transferase wcai | SAMN06296052_12634 | Not Available | + | 4932130 - 4933434 | 49552.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06296052_12635 | Not Available | + | 4934902 - 4938846 | 138786.0 |
| methyltransferase domain-containing protein | SAMN06296052_12636 | Not Available | - | 4939828 - 4940712 | 32502.1 |
| undecaprenyl-phosphate galactose phosphotransferase/putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN06296052_12637 | Not Available | + | 4941532 - 4942896 | 52011.2 |
| hypothetical protein | SAMN06296052_12638 | Not Available | + | 4943298 - 4944101 | 29573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.