Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | SAMN06296052_12547 | Not Available | + | 4873403 - 4874941 | 57538.7 |
| acetyl esterase/lipase | SAMN06296052_12548 | Not Available | + | 4875341 - 4876291 | 33928.5 |
| n-terminal ig-like domain of cellulase | SAMN06296052_12549 | Not Available | + | 4876873 - 4879407 | 94750.8 |
| aldose 1-epimerase | SAMN06296052_12550 | Not Available | + | 4880368 - 4881579 | 43936.1 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e/beta-phosphoglucomutase family hydrolase | SAMN06296052_12551 | Not Available | + | 4881737 - 4882408 | 25180.6 |
| l-arabinose isomerase | SAMN06296052_12552 | Not Available | - | 4882482 - 4883984 | 56257.2 |
| solute:na+ symporter, sss family | SAMN06296052_12553 | Not Available | - | 4884070 - 4885944 | 68036.4 |
| l-ribulose 5-phosphate 4-epimerase | SAMN06296052_12554 | Not Available | - | 4886083 - 4886784 | 26370.2 |
| l-ribulokinase | SAMN06296052_12555 | Not Available | - | 4886788 - 4888524 | 63321.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN06296052_12556 | Not Available | - | 4888615 - 4889325 | 27571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.