Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate binding domain-containing protein | SAMN06296052_12537 | Not Available | + | 4856558 - 4858708 | 77363.4 |
| enterochelin esterase | SAMN06296052_12538 | Not Available | + | 4858983 - 4859840 | 32211.1 |
| endo-1,4-beta-xylanase | SAMN06296052_12539 | Not Available | + | 4860318 - 4861511 | 44848.8 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN06296052_12540 | Not Available | + | 4861522 - 4863480 | 73501.4 |
| protein of unknown function | SAMN06296052_12541 | Not Available | + | 4863618 - 4864472 | 31086.5 |
| catechol 2,3-dioxygenase | SAMN06296052_12542 | Not Available | + | 4864595 - 4865116 | 19168.2 |
| beta-xylosidase | SAMN06296052_12543 | Not Available | + | 4865204 - 4866796 | 58751.0 |
| alpha-n-arabinofuranosidase | SAMN06296052_12544 | Not Available | + | 4866930 - 4868690 | 65242.1 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN06296052_12545 | Not Available | + | 4869173 - 4870135 | 34830.0 |
| alpha-l-fucosidase 2 | SAMN06296052_12546 | Not Available | + | 4870255 - 4872735 | 91610.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.