Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | SAMN06296052_12343 | Not Available | - | 4688328 - 4688813 | 18459.3 |
| radical sam/cys-rich domain-containing protein | SAMN06296052_12344 | Not Available | - | 4688890 - 4689957 | 39630.5 |
| alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein | SAMN06296052_12345 | Not Available | - | 4689961 - 4690296 | 12343.9 |
| hypothetical protein | SAMN06296052_12346 | Not Available | - | 4690478 - 4691191 | 25908.9 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN06296052_12347 | Not Available | - | 4691365 - 4692129 | 28693.1 |
| protein of unknown function | SAMN06296052_12348 | Not Available | - | 4692291 - 4692512 | 8426.92 |
| hypothetical protein | SAMN06296052_12349 | Not Available | - | 4692554 - 4693150 | 22420.9 |
| calcineurin-like phosphoesterase | SAMN06296052_12350 | Not Available | - | 4693161 - 4693955 | 30093.5 |
| dna topoisomerase-3 | SAMN06296052_12351 | Not Available | + | 4694292 - 4696730 | 91594.3 |
| hypothetical protein | SAMN06296052_12352 | Not Available | - | 4696794 - 4697234 | 15870.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.