Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar or nucleoside kinase, ribokinase family | SAMN06296052_12277 | Not Available | + | 4635241 - 4636164 | 34176.1 |
| hypothetical protein | SAMN06296052_12278 | Not Available | + | 4636319 - 4636540 | 8472.85 |
| geranylgeranyl reductase family | SAMN06296052_12279 | Not Available | + | 4636678 - 4637916 | 45904.6 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06296052_12280 | Not Available | - | 4637984 - 4639699 | 66363.2 |
| ribonuclease p protein component | SAMN06296052_12281 | Not Available | + | 4640056 - 4640466 | 15733.1 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN06296052_12282 | Not Available | + | 4640505 - 4642154 | 61214.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN06296052_12283 | Not Available | + | 4642321 - 4643016 | 25031.4 |
| protein of unknown function | SAMN06296052_12284 | Not Available | + | 4643026 - 4643538 | 19272.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_1231 | Not Available | - | 4644221 - 4644940 | 26061.9 |
| hypothetical protein | SAMN06296052_1232 | Not Available | + | 4645257 - 4646306 | 40597.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.