Pontibacter ummariensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter ummariensis is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C. As a heterotrophic organism, it derives its energy from organic compounds, necessitating the presence of other carbon sources for growth. This microbe displays an aerobic metabolism, requiring oxygen for its metabolic processes. The morphological characteristics of P. ummariensis, combined with its physiological traits, suggest that it plays a significant role in its ecological niche, likely contributing to the degradation of organic material in its environment. Such bacteria are commonly found in diverse habitats, including soil and aquatic systems, where they may influence nutrient cycling and organic matter decomposition. The specific adaptation to aerobic conditions implies that P. ummariensis could participate in processes such as the oxidation of organic substrates, potentially impacting the dynamics of microbial communities in oxygen-rich environments. Understanding the ecological role of Pontibacter ummariensis may provide insights into its contribution to biogeochemical cycles, particularly in regions where organic material is abundant and oxygen levels are sufficient to support aerobic microbial life.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter ummariensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pontibacter ummariensis

Accession NumberFZOQ00000000.1

Gene Summary

Adenine Count

1476968 bp

Thymine Count

1491156 bp

Guanine Count

1505158 bp

Cytosine Count

1500213 bp

Genome Length

5973733 bp

Protein-coding Genes

5122 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sugar or nucleoside kinase, ribokinase familySAMN06296052_12277Not Available+4635241 - 463616434176.1
hypothetical proteinSAMN06296052_12278Not Available+4636319 - 46365408472.85
geranylgeranyl reductase familySAMN06296052_12279Not Available+4636678 - 463791645904.6
predicted metalloprotease, contains c-terminal pdz domainSAMN06296052_12280Not Available-4637984 - 463969966363.2
ribonuclease p protein componentSAMN06296052_12281Not Available+4640056 - 464046615733.1
c-terminal processing peptidase-3. serine peptidase. merops family s41aSAMN06296052_12282Not Available+4640505 - 464215461214.9
trna threonylcarbamoyladenosine biosynthesis protein tsabSAMN06296052_12283Not Available+4642321 - 464301625031.4
protein of unknown functionSAMN06296052_12284Not Available+4643026 - 464353819272.5
outer membrane protein beta-barrel domain-containing proteinSAMN06296052_1231Not Available-4644221 - 464494026061.9
hypothetical proteinSAMN06296052_1232Not Available+4645257 - 464630640597.3

Displaying genes 4041 – 4050 of 5193 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites