Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | SAMN06296052_12257 | Not Available | + | 4607448 - 4610270 | 105421.0 |
| triosephosphate isomerase | SAMN06296052_12258 | Not Available | + | 4610377 - 4611138 | 28156.3 |
| hypothetical protein | SAMN06296052_12259 | Not Available | + | 4611243 - 4611620 | 14372.1 |
| ribosomal protein l11 methyltransferase | SAMN06296052_12260 | Not Available | + | 4611625 - 4612455 | 31293.8 |
| hypothetical protein | SAMN06296052_12261 | Not Available | + | 4612467 - 4617236 | 175759.0 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN06296052_12262 | Not Available | + | 4617408 - 4618052 | 23004.2 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN06296052_12263 | Not Available | + | 4618142 - 4619503 | 50024.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06296052_12264 | Not Available | - | 4619694 - 4620365 | 25083.3 |
| magnesium chelatase family protein | SAMN06296052_12265 | Not Available | - | 4620907 - 4622445 | 56189.1 |
| pas domain s-box-containing protein | SAMN06296052_12266 | Not Available | + | 4622636 - 4624879 | 83455.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.