Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN06296052_12149 | Not Available | + | 4510075 - 4510446 | 13570.6 |
| carboxypepd_reg-like domain-containing protein | SAMN06296052_12150 | Not Available | + | 4510433 - 4513042 | 99892.6 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN06296052_12151 | Not Available | + | 4513061 - 4513780 | 26075.5 |
| protein of unknown function | SAMN06296052_12152 | Not Available | + | 4513795 - 4514361 | 21273.8 |
| fatty acid hydroxylase superfamily protein | SAMN06296052_12153 | Not Available | + | 4514368 - 4514988 | 24173.7 |
| pap2 superfamily protein | SAMN06296052_12154 | Not Available | + | 4514990 - 4515940 | 35648.9 |
| calcineurin-like phosphoesterase | SAMN06296052_12155 | Not Available | + | 4516114 - 4516923 | 31510.5 |
| hypothetical protein | SAMN06296052_12156 | Not Available | + | 4516892 - 4517506 | 22651.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN06296052_12157 | Not Available | + | 4517518 - 4518171 | 23735.7 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN06296052_12158 | Not Available | - | 4518581 - 4519618 | 39930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.