Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06296052_1219 | Not Available | + | 4463161 - 4464156 | 36816.9 |
| bacteroides conjugative transposon trak protein | SAMN06296052_12110 | Not Available | + | 4464174 - 4464782 | 23324.2 |
| hypothetical protein | SAMN06296052_12111 | Not Available | + | 4464760 - 4465146 | 14443.6 |
| bacteroides conjugative transposon tram protein | SAMN06296052_12112 | Not Available | + | 4465133 - 4466314 | 44887.7 |
| bacteroides conjugative transposon tran protein | SAMN06296052_12113 | Not Available | + | 4466316 - 4467104 | 30065.1 |
| hypothetical protein | SAMN06296052_12114 | Not Available | + | 4467101 - 4467559 | 16998.9 |
| type iv secretory system conjugative dna transfer | SAMN06296052_12115 | Not Available | + | 4467664 - 4469631 | 74424.8 |
| helix-turn-helix domain-containing protein | SAMN06296052_12116 | Not Available | + | 4469628 - 4469978 | 13238.9 |
| high-affinity iron transporter | SAMN06296052_12117 | Not Available | - | 4470760 - 4472715 | 72309.5 |
| dihydrolipoamide dehydrogenase | SAMN06296052_12118 | Not Available | - | 4473063 - 4474463 | 50297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.