Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Pontibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Pontibacter |
| Species | Pontibacter ummariensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pontibacter ummariensis
Accession NumberFZOQ00000000.1
Gene Summary
Adenine Count
1476968 bp
Thymine Count
1491156 bp
Guanine Count
1505158 bp
Cytosine Count
1500213 bp
Genome Length
5973733 bp
Protein-coding Genes
5122 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN06296052_12090 | Not Available | - | 4451743 - 4453122 | 51829.1 |
| primary replicative dna helicase | SAMN06296052_12091 | Not Available | + | 4453280 - 4454854 | 58189.5 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN06296052_1211 | Not Available | + | 4455395 - 4456972 | 59491.6 |
| chromosome partitioning protein | SAMN06296052_1212 | Not Available | + | 4456993 - 4457622 | 23810.7 |
| hypothetical protein | SAMN06296052_1213 | Not Available | + | 4457695 - 4458189 | 17867.2 |
| hypothetical protein | SAMN06296052_1214 | Not Available | + | 4458344 - 4458754 | 15215.4 |
| protein of unknown function | SAMN06296052_1215 | Not Available | + | 4458767 - 4459072 | 10574.4 |
| bacteroides conjugation system atpase, trag family | SAMN06296052_1216 | Not Available | + | 4459427 - 4461871 | 93629.3 |
| hypothetical protein | SAMN06296052_1217 | Not Available | + | 4461846 - 4462517 | 25030.8 |
| hypothetical protein | SAMN06296052_1218 | Not Available | + | 4462533 - 4463156 | 23681.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.